BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E11LP1|AL425267
(1029 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1618 1903 0.0
>3x_Contig1618
Length = 12146
Score = 1903 bits (955), Expect = 0.0
Identities = 1012/1029 (98%), Gaps = 5/1029 (0%)
Strand = Plus / Minus
Query: 1 gatccgaaatgcctggctgggatgtaagtacttcaaacgaagggaccaacttctcgagag 60
|||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 10355 gatccgaaattcctggctgggatgtacgttcttcaaacgaagggaccaacttctcgagag 10296
Query: 61 agtgaaaaaatgtgacatctaccatgtaaataatatcattacttgagtgcactttacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10295 agtgaaaaaatgtgacatctaccatgtaaataatatcattacttgagtgcactttacttc 10236
Query: 121 tatataagctctattccattcacaatactaaactactccaactctaggaattatccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10235 tatataagctctattccattcacaatactaaactactccaactctaggaattatccacag 10176
Query: 181 gtttttttctccatcagtagttcctgttattgttcctgtgcttctggggaaacagccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10175 gtttttttctccatcagtagttcctgttattgttcctgtgcttctggggaaacagccata 10116
Query: 241 cttgggggacatgctagaaactaaaagcttaaatactagctgattgctttacagaaaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10115 cttgggggacatgctagaaactaaaagcttaaatactagctgattgctttacagaaaggt 10056
Query: 301 acaattatgagcaaacagaaacactacatccgtgatcagtgtatgtttcgtgtacatagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10055 acaattatgagcaaacagaaacactacatccgtgatcagtgtatgtttcgtgtacatagc 9996
Query: 361 tattcgagaaagtatatggcagatttggactctatctccgaaaaagaaatagtgtaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9995 tattcgagaaagtatatggcagatttggactctatctccgaaaaagaaatagtgtaagta 9936
Query: 421 gaactcattcgcagtgttgtcgtgataattgamaaggtcatctacttatgcactaatgam 480
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9935 gaactcattcgcagtgttgtcgtgataattgaaaaggtcatctacttatgcactaatgaa 9876
Query: 481 aattttttcccttttcccctgctccagattgtttctgtttctattgamacagatgtacat 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9875 aattttttcccttttcccctgctccagattgtttctgtttctattgaaacagatgtacat 9816
Query: 541 gtaattgtccggtaattaamamagttttgttcgaaattaacctgggatttatgactctcg 600
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 9815 gtaattgtccggtaattaaaaaagttttgttcgaaattaacctgggatttatgactctcg 9756
Query: 601 agctgaaaatggttgtgccattttggtacttactaaacgtacatacatataamtttacat 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9755 agctgaaaatggttgtgccattttggtacttactaaacgtacatacatataaatttacat 9696
Query: 661 ttacatatacatataaatacgtatgtgtatggtaagctttctatgagcaattagtggtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9695 ttacatatacatataaatacgtatgtgtatggtaagctttctatgagcaattagtggtat 9636
Query: 721 tcagtgtagagttatcctttcgtatgaccaataactatatacgtttagaccaagagggaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9635 tcagtgtagagttatcctttcgtatgaccaataactatatacgtttagaccaagagggaa 9576
Query: 781 gtagtgtaattaagggattgatgccagggtctatatcttcgtcatcaaagaaaaaagttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9575 gtagtgtaattaagggattgatgccagggtctatatcttcgtcatcaaagaaaaaagttc 9516
Query: 841 aagagtcagaagagatagtcatatcttctgatgataacagcagttatttcaacaactcta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9515 aagagtcagaagagatagtcatatcttctgatgataacagcagttatttcaacaactcta 9456
Query: 901 cgtcgagaaaacttcagaatcgtcatgtgcactttataggtatatcaggtgtcattggga 960
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 9455 cgtcgagaaaacttcagaatcgtcatgtgcaacttataggtatatcaggtgtcattggga 9396
Query: 961 cagcgkttgtttgtcagtatcggt-argcg-tataccgtggtggaccgg-atcgttaa-t 1016
||||| |||||||||||||||||| | ||| |||||||||||||||||| |||||||| |
Sbjct: 9395 cagcg-ttgtttgtcagtatcggtaaggcgttataccgtggtggaccggtatcgttaatt 9337
Query: 1017 cttggattt 1025
|||||||||
Sbjct: 9336 cttggattt 9328
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7186
Number of Sequences: 1807
Number of extensions: 7186
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 1029
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1013
effective length of database: 10,329,639
effective search space: 10463924307
effective search space used: 10463924307
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)